Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.78□□□□□ -1.16
LRCH3Q96II8 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LRCH3Q96II8 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
LRCH3Q96II8 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 RNU6-996P-201ENST00000365438 107 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 RNU6-108P-201ENST00000365558 107 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC074085.1-201ENST00000413598 418 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 METTL15P3-201ENST00000415522 1221 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 RPL23AP30-201ENST00000432419 501 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 FUNDC2P2-202ENST00000443452 493 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 TVP23CP1-201ENST00000450317 639 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 SBDSP1-204ENST00000453858 737 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC104308.1-201ENST00000454621 333 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 SLC25A51P1-201ENST00000468432 871 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC092324.1-201ENST00000468671 324 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC008967.1-201ENST00000504843 163 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 RNU6-864P-201ENST00000516256 108 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 RNY3P15-201ENST00000516297 97 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 AP000435.1-201ENST00000528539 496 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 NCAPGP2-201ENST00000557911 754 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC002310.3-201ENST00000569728 723 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 MIR5690-201ENST00000583739 73 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC063977.7-201ENST00000594454 337 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 AP004247.3-201ENST00000608682 624 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 CDC27P3-201ENST00000635418 1910 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 AL080317.3-201ENST00000607434 4315 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LRCH3Q96II8 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.77□□□□□ -1.17
LRCH3Q96II8 SAMMSON-210ENST00000641260 1308 ntBASIC7.77□□□□□ -1.17
LRCH3Q96II8 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 SPATA2P1-201ENST00000431223 2055 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 RN7SKP275-201ENST00000364626 301 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 Y_RNA.291-201ENST00000364886 113 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 RN7SKP81-201ENST00000365603 331 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
LRCH3Q96II8 MIR937-201ENST00000401271 86 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 RPSAP72-201ENST00000407020 358 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 EEF1GP7-201ENST00000422983 703 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 AC019097.1-201ENST00000424783 735 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.76□□□□□ -1.17
LRCH3Q96II8 FABP7P2-201ENST00000429946 379 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 SNRPEP7-201ENST00000438350 220 ntBASIC7.76□□□□□ -1.17
LRCH3Q96II8 DNAJC19P5-201ENST00000443295 316 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms