Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
C9orf40Q8IXQ3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 BTBD10P1-201ENST00000549824 1352 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 RNU6-1251P-201ENST00000364502 107 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 RNA5SP505-201ENST00000364748 108 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 RN7SKP199-201ENST00000410325 305 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AL358176.3-201ENST00000420757 454 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 MRPS33P4-201ENST00000434892 317 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 NMNAT1P2-201ENST00000435192 860 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 ARAFP2-201ENST00000440565 559 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 MRPL48P1-201ENST00000445390 636 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 SEPT7P3-201ENST00000455017 621 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 MTND4LP2-201ENST00000502312 285 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 RNU6-491P-201ENST00000516099 110 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AC092868.3-201ENST00000560515 784 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 SNORD91B-202ENST00000608459 222 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AL451049.1-201ENST00000608672 497 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AC003001.2-201ENST00000616294 831 ntBASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.32□□□□□ -1.72
C9orf40Q8IXQ3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 SNORA70F-201ENST00000384142 135 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 RNU6-398P-201ENST00000384143 109 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 RNU6-1263P-201ENST00000384601 106 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 MIR192-201ENST00000384915 110 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AL592291.1-201ENST00000403830 352 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AL080315.1-201ENST00000406055 466 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 RPS16P5-201ENST00000406501 404 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AC069213.2-201ENST00000420238 366 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AC104651.2-201ENST00000447549 528 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 RPS29P33-201ENST00000456717 146 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AC007688.1-201ENST00000475592 759 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AC025181.1-201ENST00000477507 416 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 RPL23AP72-201ENST00000492447 435 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 MTND2P13-201ENST00000577438 1039 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 SNORD39.2-201ENST00000579995 76 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 RNF138P2-201ENST00000603490 592 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AC104307.1-201ENST00000616142 196 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AC004232.3-201ENST00000622977 525 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 LINC00216-201ENST00000623548 1126 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 U3.53-201ENST00000628922 216 ntBASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
C9orf40Q8IXQ3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
C9orf40Q8IXQ3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms