Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 AP003717.3-201ENST00000544832 1180 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.05□□□□□ -1.6
PCNAP12004 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.05□□□□□ -1.6
PCNAP12004 MTND1P8-201ENST00000571424 950 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.05□□□□□ -1.6
PCNAP12004 AC007390.2-201ENST00000606229 3803 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AC018754.1-201ENST00000607486 925 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AC023813.4-201ENST00000607580 580 ntBASIC5.05□□□□□ -1.6
PCNAP12004 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.05□□□□□ -1.6
PCNAP12004 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
PCNAP12004 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PCNAP12004 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PCNAP12004 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 VN2R3P-201ENST00000422626 1412 ntBASIC5.05□□□□□ -1.6
PCNAP12004 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.05□□□□□ -1.6
PCNAP12004 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCNAP12004 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.04□□□□□ -1.6
PCNAP12004 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.04□□□□□ -1.6
PCNAP12004 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.04□□□□□ -1.6
PCNAP12004 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
PCNAP12004 AL627171.1-201ENST00000618845 1308 ntBASIC5.04□□□□□ -1.6
PCNAP12004 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCNAP12004 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 OR8V1P-201ENST00000395193 873 ntBASIC5.04□□□□□ -1.6
PCNAP12004 HMGB1P13-201ENST00000406019 642 ntBASIC5.04□□□□□ -1.6
PCNAP12004 OR3A2-201ENST00000408891 1076 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.04□□□□□ -1.6
PCNAP12004 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 PCNPP4-201ENST00000414817 517 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.04□□□□□ -1.6
PCNAP12004 AC106883.1-201ENST00000418805 562 ntBASIC5.04□□□□□ -1.6
PCNAP12004 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 AC093422.3-201ENST00000428506 305 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AL161722.2-201ENST00000434731 981 ntBASIC5.04□□□□□ -1.6
PCNAP12004 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.04□□□□□ -1.6
PCNAP12004 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 RRM2P4-201ENST00000441721 562 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC097499.1-201ENST00000444277 208 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC022431.1-201ENST00000450941 438 ntBASIC5.04□□□□□ -1.6
PCNAP12004 RPS3AP53-201ENST00000454716 778 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC108693.1-201ENST00000496068 432 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.04□□□□□ -1.6
PCNAP12004 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.04□□□□□ -1.6
PCNAP12004 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.04□□□□□ -1.6
PCNAP12004 RNU6-1004P-201ENST00000516584 111 ntBASIC5.04□□□□□ -1.6
PCNAP12004 RNA5SP373-201ENST00000517271 95 ntBASIC5.04□□□□□ -1.6
PCNAP12004 IGKV3D-34-201ENST00000522638 302 ntBASIC5.04□□□□□ -1.6
PCNAP12004 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.04□□□□□ -1.6
PCNAP12004 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCNAP12004 AC126177.5-201ENST00000549599 178 ntBASIC5.04□□□□□ -1.6
PCNAP12004 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.04□□□□□ -1.6
PCNAP12004 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.04□□□□□ -1.6
PCNAP12004 AL109741.3-201ENST00000561748 592 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC010735.1-201ENST00000567305 1026 ntBASIC5.04□□□□□ -1.6
PCNAP12004 MIR4789-201ENST00000577469 82 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.04□□□□□ -1.6
PCNAP12004 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.04□□□□□ -1.6
PCNAP12004 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCNAP12004 AC018618.2-201ENST00000604770 446 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC015908.5-201ENST00000623289 343 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC136428.4-201ENST00000634254 1155 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AC132825.7-201ENST00000638744 335 ntBASIC5.04□□□□□ -1.6
PCNAP12004 AP001273.1-201ENST00000624493 3152 ntBASIC5.04□□□□□ -1.6
PCNAP12004 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 AC092747.4-201ENST00000620519 1861 ntBASIC5.04□□□□□ -1.6
PCNAP12004 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 AL445437.1-201ENST00000623157 3087 ntBASIC5.04□□□□□ -1.6
PCNAP12004 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.04□□□□□ -1.6
PCNAP12004 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCNAP12004 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCNAP12004 AC011447.7-201ENST00000624228 1590 ntBASIC5.04□□□□□ -1.6
PCNAP12004 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
PCNAP12004 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.03□□□□□ -1.6
PCNAP12004 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCNAP12004 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms