Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.16□□□□□ -1.74
SPTA1P02549 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTA1P02549 SNORA70.24-201ENST00000517233 118 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.16□□□□□ -1.74
SPTA1P02549 AC022884.2-201ENST00000578535 580 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.16□□□□□ -1.74
SPTA1P02549 AC012468.1-201ENST00000604888 430 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 OR2BH1P-201ENST00000608850 864 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTA1P02549 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTA1P02549 EIF2AP4-201ENST00000424793 1781 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.16□□□□□ -1.74
SPTA1P02549 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SPTA1P02549 RNA5SP22-201ENST00000365393 109 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTA1P02549 OR8G2P-201ENST00000412796 908 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 GLUD1P9-201ENST00000420997 1173 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.16□□□□□ -1.74
SPTA1P02549 RPL5P32-201ENST00000454085 879 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 RN7SL429P-201ENST00000479090 223 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 RN7SL489P-201ENST00000486185 223 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 RN7SL327P-201ENST00000488659 223 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 MTND4LP2-201ENST00000502312 285 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 AC146944.2-203ENST00000502493 354 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 AC139495.1-202ENST00000513164 354 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.16□□□□□ -1.74
SPTA1P02549 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.16□□□□□ -1.74
SPTA1P02549 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.16□□□□□ -1.74
SPTA1P02549 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.16□□□□□ -1.74
SPTA1P02549 AC112230.1-201ENST00000604342 547 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 RN7SL853P-201ENST00000617250 223 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTA1P02549 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SPTA1P02549 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTA1P02549 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTA1P02549 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPTA1P02549 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.16□□□□□ -1.74
SPTA1P02549 AC004817.4-201ENST00000602396 3625 ntBASIC4.16□□□□□ -1.74
SPTA1P02549 CASC19-284ENST00000642142 1868 ntBASIC4.15□□□□□ -1.74
SPTA1P02549 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SPTA1P02549 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.15□□□□□ -1.74
SPTA1P02549 LARP1BP1-201ENST00000506036 1359 ntBASIC4.15□□□□□ -1.74
SPTA1P02549 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SPTA1P02549 AL161909.1-201ENST00000397390 712 ntBASIC4.15□□□□□ -1.74
SPTA1P02549 RNU6-628P-201ENST00000410675 107 ntBASIC4.15□□□□□ -1.74
SPTA1P02549 RN7SL517P-201ENST00000462240 305 ntBASIC4.15□□□□□ -1.74
SPTA1P02549 ENPP7P11-201ENST00000505915 627 ntBASIC4.15□□□□□ -1.74
SPTA1P02549 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SPTA1P02549 AC018695.5-201ENST00000605872 315 ntBASIC4.15□□□□□ -1.74
SPTA1P02549 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.15□□□□□ -1.74
SPTA1P02549 OR2L1P-202ENST00000641567 1023 ntBASIC4.15□□□□□ -1.74
SPTA1P02549 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.15□□□□□ -1.74
SPTA1P02549 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.15□□□□□ -1.74
SPTA1P02549 AC073346.2-201ENST00000624724 2058 ntBASIC4.15□□□□□ -1.74
SPTA1P02549 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.15□□□□□ -1.75
SPTA1P02549 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SPTA1P02549 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SPTA1P02549 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.15□□□□□ -1.75
SPTA1P02549 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SPTA1P02549 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SPTA1P02549 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SPTA1P02549 AP000580.1-201ENST00000404439 358 ntBASIC4.15□□□□□ -1.75
SPTA1P02549 RPL12P9-201ENST00000412942 488 ntBASIC4.15□□□□□ -1.75
SPTA1P02549 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SPTA1P02549 AC079804.1-201ENST00000461922 436 ntBASIC4.15□□□□□ -1.75
SPTA1P02549 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.15□□□□□ -1.75
SPTA1P02549 VN1R105P-201ENST00000486595 910 ntBASIC4.15□□□□□ -1.75
SPTA1P02549 TPT1P3-201ENST00000492841 512 ntBASIC4.15□□□□□ -1.75
SPTA1P02549 PARP4P3-201ENST00000510265 317 ntBASIC4.15□□□□□ -1.75
SPTA1P02549 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.15□□□□□ -1.75
SPTA1P02549 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SPTA1P02549 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.15□□□□□ -1.75
SPTA1P02549 MIR5195-201ENST00000583555 115 ntBASIC4.15□□□□□ -1.75
SPTA1P02549 MIR6875-201ENST00000617506 72 ntBASIC4.15□□□□□ -1.75
SPTA1P02549 OR6C71P-202ENST00000641886 1107 ntBASIC4.15□□□□□ -1.75
SPTA1P02549 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SPTA1P02549 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SPTA1P02549 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SPTA1P02549 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SPTA1P02549 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SPTA1P02549 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SPTA1P02549 MIR372-201ENST00000362225 67 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 RN7SKP74-201ENST00000362849 309 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 Y_RNA.500-201ENST00000384466 111 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.14□□□□□ -1.75
SPTA1P02549 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.14□□□□□ -1.75
SPTA1P02549 RPL7P9-201ENST00000468715 747 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.14□□□□□ -1.75
SPTA1P02549 Y_RNA.719-201ENST00000517156 106 ntBASIC4.14□□□□□ -1.75
SPTA1P02549 HNRNPCP4-201ENST00000571636 900 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms