Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.12□□□□□ -1.59
UBE4BO95155 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE4BO95155 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.12□□□□□ -1.59
UBE4BO95155 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.12□□□□□ -1.59
UBE4BO95155 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.12□□□□□ -1.59
UBE4BO95155 AC104629.2-201ENST00000468627 598 ntBASIC5.12□□□□□ -1.59
UBE4BO95155 RN7SL346P-201ENST00000491561 294 ntBASIC5.12□□□□□ -1.59
UBE4BO95155 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE4BO95155 AC098799.3-201ENST00000506095 438 ntBASIC5.12□□□□□ -1.59
UBE4BO95155 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.12□□□□□ -1.59
UBE4BO95155 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.12□□□□□ -1.59
UBE4BO95155 DPRXP4-201ENST00000578053 568 ntBASIC5.12□□□□□ -1.59
UBE4BO95155 MIR4480-201ENST00000582492 71 ntBASIC5.12□□□□□ -1.59
UBE4BO95155 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.12□□□□□ -1.59
UBE4BO95155 SNORD91B-202ENST00000608459 222 ntBASIC5.12□□□□□ -1.59
UBE4BO95155 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE4BO95155 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE4BO95155 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE4BO95155 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE4BO95155 OR51H2P-202ENST00000641424 3046 ntBASIC5.12□□□□□ -1.59
UBE4BO95155 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE4BO95155 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.12□□□□□ -1.59
UBE4BO95155 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
UBE4BO95155 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UBE4BO95155 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.12□□□□□ -1.59
UBE4BO95155 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
UBE4BO95155 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.11□□□□□ -1.59
UBE4BO95155 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.11□□□□□ -1.59
UBE4BO95155 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
UBE4BO95155 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBE4BO95155 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.11□□□□□ -1.59
UBE4BO95155 PCAT14-202ENST00000627127 3935 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UBE4BO95155 AC007342.9-201ENST00000623877 1385 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
UBE4BO95155 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.11□□□□□ -1.59
UBE4BO95155 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBE4BO95155 MAPK10-304ENST00000641341 3984 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 AC093775.1-201ENST00000624154 1868 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBE4BO95155 RNU6-618P-201ENST00000363518 112 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 RNU6-819P-201ENST00000364116 107 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
UBE4BO95155 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
UBE4BO95155 SNORD65-201ENST00000391079 73 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBE4BO95155 AL691447.1-201ENST00000419456 387 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 AL360081.1-201ENST00000428299 555 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.11□□□□□ -1.59
UBE4BO95155 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.11□□□□□ -1.59
UBE4BO95155 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.11□□□□□ -1.59
UBE4BO95155 CCRL1P1-201ENST00000449542 1053 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 AC069277.2-201ENST00000454211 432 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 OR9N1P-201ENST00000491296 333 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.11□□□□□ -1.59
UBE4BO95155 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.11□□□□□ -1.59
UBE4BO95155 SNORA70.17-201ENST00000516449 133 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.11□□□□□ -1.59
UBE4BO95155 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.11□□□□□ -1.59
UBE4BO95155 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.11□□□□□ -1.59
UBE4BO95155 HMGB2P1-201ENST00000591146 634 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 AC005520.3-201ENST00000602874 370 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.11□□□□□ -1.59
UBE4BO95155 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
UBE4BO95155 AC133552.1-201ENST00000569988 4007 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
UBE4BO95155 VPS35P1-201ENST00000563400 1518 ntBASIC5.11□□□□□ -1.59
UBE4BO95155 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.11□□□□□ -1.59
UBE4BO95155 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
UBE4BO95155 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.11□□□□□ -1.59
UBE4BO95155 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.1□□□□□ -1.59
UBE4BO95155 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
UBE4BO95155 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
UBE4BO95155 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBE4BO95155 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBE4BO95155 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBE4BO95155 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
UBE4BO95155 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.1□□□□□ -1.59
UBE4BO95155 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBE4BO95155 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBE4BO95155 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.1□□□□□ -1.59
UBE4BO95155 AL355852.1-201ENST00000454081 1771 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBE4BO95155 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
UBE4BO95155 AL590240.1-201ENST00000334118 313 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
UBE4BO95155 RNU6-1251P-201ENST00000364502 107 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 RNU4-7P-201ENST00000364758 141 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBE4BO95155 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
UBE4BO95155 FAR2P2-201ENST00000413041 594 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.1□□□□□ -1.59
UBE4BO95155 FAR2P4-202ENST00000425399 584 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 AL935212.3-201ENST00000450729 284 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.1□□□□□ -1.59
UBE4BO95155 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.1□□□□□ -1.59
UBE4BO95155 AL672167.3-201ENST00000465951 960 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 AC006967.1-201ENST00000467608 589 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 RPL23AP37-201ENST00000479658 549 ntBASIC5.1□□□□□ -1.59
UBE4BO95155 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms