Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC138866.2-201ENST00000508650 584 ntBASIC7.81□□□□□ -1.16
RNF40O75150 GUSBP9-201ENST00000510138 584 ntBASIC7.81□□□□□ -1.16
RNF40O75150 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.81□□□□□ -1.16
RNF40O75150 IGLVVI-25-1-201ENST00000521893 249 ntBASIC7.81□□□□□ -1.16
RNF40O75150 RGS4-209ENST00000531057 544 ntTSL 4 BASIC7.81□□□□□ -1.16
RNF40O75150 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC7.81□□□□□ -1.16
RNF40O75150 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.81□□□□□ -1.16
RNF40O75150 AC244034.2-201ENST00000562504 509 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC7.81□□□□□ -1.16
RNF40O75150 MIR1273F-201ENST00000580581 99 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AC006116.6-201ENST00000593258 1103 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AC139493.1-201ENST00000604368 397 ntBASIC7.81□□□□□ -1.16
RNF40O75150 AC097641.3-201ENST00000613523 464 ntBASIC7.81□□□□□ -1.16
RNF40O75150 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC7.81□□□□□ -1.16
RNF40O75150 OR2L1P-202ENST00000641567 1023 ntBASIC7.81□□□□□ -1.16
RNF40O75150 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
RNF40O75150 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
RNF40O75150 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 AC022507.1-201ENST00000548349 1505 ntBASIC7.81□□□□□ -1.16
RNF40O75150 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.81□□□□□ -1.16
RNF40O75150 CASC19-260ENST00000641828 2001 ntBASIC7.81□□□□□ -1.16
RNF40O75150 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.81□□□□□ -1.16
RNF40O75150 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
RNF40O75150 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.81□□□□□ -1.16
RNF40O75150 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
RNF40O75150 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC7.81□□□□□ -1.16
RNF40O75150 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF40O75150 AC008957.3-201ENST00000624112 2242 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 UG0898H09-202ENST00000623646 7040 ntBASIC7.8□□□□□ -1.16
RNF40O75150 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 AC053481.2-201ENST00000602493 1815 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 AC125232.1-201ENST00000452554 1408 ntBASIC7.8□□□□□ -1.16
RNF40O75150 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF40O75150 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 Y_RNA.100-201ENST00000363141 102 ntBASIC7.8□□□□□ -1.16
RNF40O75150 RNU6-1032P-201ENST00000384100 107 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AL583835.1-201ENST00000399570 407 ntBASIC7.8□□□□□ -1.16
RNF40O75150 MRPL42P3-201ENST00000401492 326 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AL139100.1-201ENST00000408001 498 ntBASIC7.8□□□□□ -1.16
RNF40O75150 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 RNU2-9P-201ENST00000410194 145 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AL136133.1-201ENST00000413694 376 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AL590806.1-201ENST00000415818 853 ntBASIC7.8□□□□□ -1.16
RNF40O75150 CHEK2P3-201ENST00000416118 248 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AL807761.1-201ENST00000417622 171 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC234782.4-201ENST00000417646 1048 ntBASIC7.8□□□□□ -1.16
RNF40O75150 PPIAP23-201ENST00000420099 497 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF40O75150 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 AC104837.2-201ENST00000427236 424 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC093716.1-201ENST00000435923 377 ntBASIC7.8□□□□□ -1.16
RNF40O75150 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF40O75150 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF40O75150 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF40O75150 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
RNF40O75150 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF40O75150 CTSLP6-201ENST00000458273 1002 ntBASIC7.8□□□□□ -1.16
RNF40O75150 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.8□□□□□ -1.16
RNF40O75150 RPL7P22-201ENST00000466005 733 ntBASIC7.8□□□□□ -1.16
RNF40O75150 RPL12P40-201ENST00000467028 488 ntBASIC7.8□□□□□ -1.16
RNF40O75150 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF40O75150 AC079768.1-201ENST00000503181 711 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 RPS23-208ENST00000512493 443 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF40O75150 Y_RNA.665-201ENST00000516177 98 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC7.8□□□□□ -1.16
RNF40O75150 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF40O75150 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF40O75150 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC7.8□□□□□ -1.16
RNF40O75150 OR5B10P-201ENST00000532869 642 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF40O75150 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF40O75150 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC7.8□□□□□ -1.16
RNF40O75150 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 AC108451.2-201ENST00000603875 538 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF40O75150 AC245389.1-201ENST00000605141 529 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC004852.1-201ENST00000605206 154 ntBASIC7.8□□□□□ -1.16
RNF40O75150 PRR13P7-201ENST00000605538 430 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC006335.3-201ENST00000613408 292 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC243830.2-201ENST00000618067 630 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC026108.1-201ENST00000635444 547 ntBASIC7.8□□□□□ -1.16
RNF40O75150 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.8□□□□□ -1.16
RNF40O75150 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF40O75150 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF40O75150 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms