Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 ZNF815P-204ENST00000434898 1737 ntBASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 UNC93B4-201ENST00000505679 747 ntBASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CYP46A1Q9Y6A2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CYP46A1Q9Y6A2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CYP46A1Q9Y6A2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CYP46A1Q9Y6A2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CYP46A1Q9Y6A2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 KRT8P8-201ENST00000434750 1448 ntBASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CYP46A1Q9Y6A2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CYP46A1Q9Y6A2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 UNC93B5-201ENST00000530315 699 ntBASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CYP46A1Q9Y6A2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CYP46A1Q9Y6A2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms