Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 AC093503.3-201ENST00000624917 2352 ntBASIC22.21■■□□□ 1.15
CLIC4Q9Y696 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 AC008687.6-201ENST00000596318 630 ntBASIC22.21■■□□□ 1.15
CLIC4Q9Y696 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 AL161938.1-201ENST00000569833 2180 ntBASIC22.21■■□□□ 1.15
CLIC4Q9Y696 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CLIC4Q9Y696 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.15
CLIC4Q9Y696 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
CLIC4Q9Y696 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
CLIC4Q9Y696 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 SDHAP1-207ENST00000440850 2000 ntBASIC22.2■■□□□ 1.14
CLIC4Q9Y696 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLIC4Q9Y696 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 YBX1P10-201ENST00000444752 975 ntBASIC22.19■■□□□ 1.14
CLIC4Q9Y696 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 AC104417.2-201ENST00000562989 1793 ntBASIC22.19■■□□□ 1.14
CLIC4Q9Y696 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.19■■□□□ 1.14
CLIC4Q9Y696 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 AL355802.2-201ENST00000402069 882 ntBASIC22.18■■□□□ 1.14
CLIC4Q9Y696 HLA-L-209ENST00000420110 1011 ntBASIC22.18■■□□□ 1.14
CLIC4Q9Y696 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CLIC4Q9Y696 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLIC4Q9Y696 AC141586.3-201ENST00000562166 1838 ntBASIC22.17■■□□□ 1.14
CLIC4Q9Y696 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CLIC4Q9Y696 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.17■■□□□ 1.14
CLIC4Q9Y696 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms