Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
GPC6Q9Y625 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GPC6Q9Y625 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.38■□□□□ 0.53
GPC6Q9Y625 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.37■□□□□ 0.53
GPC6Q9Y625 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
GPC6Q9Y625 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
GPC6Q9Y625 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
GPC6Q9Y625 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
GPC6Q9Y625 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
GPC6Q9Y625 ID1-201ENST00000376105 1233 ntBASIC18.36■□□□□ 0.53
GPC6Q9Y625 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
GPC6Q9Y625 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
GPC6Q9Y625 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.36■□□□□ 0.53
GPC6Q9Y625 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.36■□□□□ 0.53
GPC6Q9Y625 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
GPC6Q9Y625 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 PHGDH-210ENST00000641115 1638 ntBASIC18.35■□□□□ 0.53
GPC6Q9Y625 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 HLA-L-209ENST00000420110 1011 ntBASIC18.35■□□□□ 0.53
GPC6Q9Y625 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
GPC6Q9Y625 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.35■□□□□ 0.53
GPC6Q9Y625 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GPC6Q9Y625 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
GPC6Q9Y625 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms