Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 C1QBPP2-201ENST00000528754 825 ntBASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 RN7SL602P-201ENST00000578326 324 ntBASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 RPPH1-201ENST00000516869 333 ntBASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB13Q9Y5F0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 ABHD17AP1-201ENST00000358206 933 ntBASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 KRT16P5-201ENST00000455284 522 ntBASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PCDHB13Q9Y5F0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 PRORSD1P-201ENST00000295112 541 ntBASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDHB13Q9Y5F0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHB13Q9Y5F0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 AC017007.3-201ENST00000479865 435 ntBASIC21.45■■□□□ 1.02
PCDHB13Q9Y5F0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms