Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 AL691432.2-201ENST00000607222 2038 ntBASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 AC005332.7-201ENST00000614046 2005 ntBASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 AP000974.1-201ENST00000623909 2387 ntBASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHB3Q9Y5E6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 HLA-G-202ENST00000376815 851 ntBASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 HLA-G-203ENST00000376818 1127 ntBASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHB3Q9Y5E6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 KRASP1-201ENST00000407852 552 ntBASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 AC211429.1-201ENST00000415277 523 ntBASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 DPP3P2-201ENST00000416030 1696 ntBASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PCDHB3Q9Y5E6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 BX119927.1-201ENST00000636596 1552 ntBASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 TNXA-203ENST00000507684 2038 ntBASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.02■□□□□ 0.64
PCDHB3Q9Y5E6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB3Q9Y5E6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.63
PCDHB3Q9Y5E6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB3Q9Y5E6 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDHB3Q9Y5E6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 PTBP1P-201ENST00000554374 1601 ntBASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDHB3Q9Y5E6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms