Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 CDV3P1-201ENST00000471403 739 ntBASIC17.35■□□□□ 0.37
SSR3Q9UNL2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 AC024257.2-201ENST00000549699 147 ntBASIC17.35■□□□□ 0.37
SSR3Q9UNL2 AC012414.1-201ENST00000556676 535 ntBASIC17.35■□□□□ 0.37
SSR3Q9UNL2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR3Q9UNL2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 AC097381.1-201ENST00000429019 1296 ntBASIC17.34■□□□□ 0.37
SSR3Q9UNL2 AC131281.2-201ENST00000520478 145 ntBASIC17.34■□□□□ 0.37
SSR3Q9UNL2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR3Q9UNL2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SSR3Q9UNL2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SSR3Q9UNL2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.33■□□□□ 0.37
SSR3Q9UNL2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR3Q9UNL2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR3Q9UNL2 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR3Q9UNL2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR3Q9UNL2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR3Q9UNL2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSR3Q9UNL2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 DUX4L2-201ENST00000561772 1275 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 AC027682.1-201ENST00000562846 899 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 DUX4L6-201ENST00000626483 1275 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 DUX4L1-201ENST00000627662 1275 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 DUX4L8-201ENST00000629013 1275 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 DUX4L3-201ENST00000630187 1275 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 DUX4L7-201ENST00000630678 1275 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 DUX4L5-201ENST00000630834 1275 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 FZD10-202ENST00000539839 3282 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 BICD1-207ENST00000551848 1962 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 NOC2LP2-201ENST00000407594 1944 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSR3Q9UNL2 Z98044.1-201ENST00000632503 1764 ntBASIC17.33■□□□□ 0.36
SSR3Q9UNL2 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 PTBP1P-201ENST00000554374 1601 ntBASIC17.32■□□□□ 0.36
SSR3Q9UNL2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSR3Q9UNL2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms