Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 AC142086.2-201ENST00000569753 217 ntBASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
VTI1BQ9UEU0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 AC023632.3-201ENST00000521633 145 ntBASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 MIR4758-201ENST00000577688 71 ntBASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 AL589743.5-201ENST00000616611 1050 ntBASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
VTI1BQ9UEU0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 LSM12P1-201ENST00000411836 588 ntBASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 AC073210.2-201ENST00000430369 194 ntBASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 AL138781.1-201ENST00000566567 1274 ntBASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 AC092118.2-201ENST00000613495 667 ntBASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 KRT17P1-201ENST00000399211 1546 ntBASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
VTI1BQ9UEU0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 CROCCP3-202ENST00000420820 1947 ntBASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTI1BQ9UEU0 AC138932.1-201ENST00000534164 6830 ntBASIC19.08■□□□□ 0.65
VTI1BQ9UEU0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.08■□□□□ 0.65
VTI1BQ9UEU0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VTI1BQ9UEU0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
VTI1BQ9UEU0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms