Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 AC006557.6-201ENST00000623071 864 ntBASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LINC00474Q9P2X8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 FAM201B-201ENST00000458407 597 ntBASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 RPS2P52-201ENST00000469610 820 ntBASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 TMEM179-206ENST00000616017 1645 ntBASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LINC00474Q9P2X8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00474Q9P2X8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LINC00474Q9P2X8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC12.65□□□□□ -0.39
LINC00474Q9P2X8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 AC116351.2-201ENST00000606540 1585 ntBASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 AC009237.14-201ENST00000609975 1594 ntBASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LINC00474Q9P2X8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms