Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.86■□□□□ 0.45
LRFN1Q9P244 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.86■□□□□ 0.45
LRFN1Q9P244 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.86■□□□□ 0.45
LRFN1Q9P244 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 AC145285.6-201ENST00000604632 637 ntBASIC17.86■□□□□ 0.45
LRFN1Q9P244 DGCR10-201ENST00000609839 495 ntBASIC17.86■□□□□ 0.45
LRFN1Q9P244 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.86■□□□□ 0.45
LRFN1Q9P244 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
LRFN1Q9P244 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LRFN1Q9P244 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 MIR1224-201ENST00000408193 85 ntBASIC17.85■□□□□ 0.45
LRFN1Q9P244 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.85■□□□□ 0.45
LRFN1Q9P244 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LRFN1Q9P244 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 LINC01568-207ENST00000641790 1380 ntBASIC17.84■□□□□ 0.45
LRFN1Q9P244 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LRFN1Q9P244 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.84■□□□□ 0.45
LRFN1Q9P244 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
LRFN1Q9P244 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRFN1Q9P244 AC009237.14-201ENST00000609975 1594 ntBASIC17.83■□□□□ 0.45
LRFN1Q9P244 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LRFN1Q9P244 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRFN1Q9P244 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.83■□□□□ 0.45
LRFN1Q9P244 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.83■□□□□ 0.45
LRFN1Q9P244 CYP2D8P-201ENST00000433633 1490 ntBASIC17.83■□□□□ 0.45
LRFN1Q9P244 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.83■□□□□ 0.45
LRFN1Q9P244 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LRFN1Q9P244 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRFN1Q9P244 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LRFN1Q9P244 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
LRFN1Q9P244 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.83■□□□□ 0.44
LRFN1Q9P244 AC097488.1-201ENST00000507834 756 ntBASIC17.83■□□□□ 0.44
LRFN1Q9P244 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.83■□□□□ 0.44
LRFN1Q9P244 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
LRFN1Q9P244 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LRFN1Q9P244 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LRFN1Q9P244 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN1Q9P244 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
LRFN1Q9P244 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN1Q9P244 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.83■□□□□ 0.44
LRFN1Q9P244 RCC2P6-201ENST00000526625 1557 ntBASIC17.83■□□□□ 0.44
LRFN1Q9P244 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LRFN1Q9P244 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LRFN1Q9P244 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.82■□□□□ 0.44
LRFN1Q9P244 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms