Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 AC083906.2-201ENST00000511578 360 ntBASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 MKRN4P-201ENST00000444706 1521 ntBASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 AC010980.2-201ENST00000587099 1412 ntBASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 AL032819.2-201ENST00000624543 2162 ntBASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.74■□□□□ 0.75
ABCF3Q9NUQ8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 MCRIP2P1-201ENST00000394346 511 ntBASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 AL356652.1-201ENST00000615962 565 ntBASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCF3Q9NUQ8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 AL121832.2-201ENST00000610979 668 ntBASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ABCF3Q9NUQ8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 AC087633.2-202ENST00000565166 1439 ntBASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCF3Q9NUQ8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCF3Q9NUQ8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.7■□□□□ 0.74
ABCF3Q9NUQ8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCF3Q9NUQ8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms