Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CA15P1-201ENST00000481698 905 ntBASIC20.67■□□□□ 0.9
TLR9Q9NR96 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
TLR9Q9NR96 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.67■□□□□ 0.9
TLR9Q9NR96 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TLR9Q9NR96 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.67■□□□□ 0.9
TLR9Q9NR96 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TLR9Q9NR96 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR9Q9NR96 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TLR9Q9NR96 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 AL160286.2-201ENST00000567150 934 ntBASIC20.66■□□□□ 0.9
TLR9Q9NR96 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.66■□□□□ 0.9
TLR9Q9NR96 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 IER3-202ENST00000376377 1350 ntBASIC20.66■□□□□ 0.9
TLR9Q9NR96 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 SMG8-203ENST00000578922 2178 ntBASIC20.66■□□□□ 0.9
TLR9Q9NR96 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TLR9Q9NR96 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.66■□□□□ 0.9
TLR9Q9NR96 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 KRT18P48-201ENST00000434763 852 ntBASIC20.65■□□□□ 0.9
TLR9Q9NR96 AL359075.1-203ENST00000462729 1002 ntBASIC20.65■□□□□ 0.9
TLR9Q9NR96 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 AC140113.3-201ENST00000605663 199 ntBASIC20.65■□□□□ 0.9
TLR9Q9NR96 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.65■□□□□ 0.9
TLR9Q9NR96 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TLR9Q9NR96 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.64■□□□□ 0.9
TLR9Q9NR96 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TLR9Q9NR96 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.64■□□□□ 0.9
TLR9Q9NR96 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.64■□□□□ 0.89
TLR9Q9NR96 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TLR9Q9NR96 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.64■□□□□ 0.89
TLR9Q9NR96 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TLR9Q9NR96 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TLR9Q9NR96 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TLR9Q9NR96 AL671277.2-201ENST00000458060 996 ntBASIC20.64■□□□□ 0.89
TLR9Q9NR96 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TLR9Q9NR96 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.64■□□□□ 0.89
TLR9Q9NR96 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.64■□□□□ 0.89
TLR9Q9NR96 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
TLR9Q9NR96 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.64■□□□□ 0.89
TLR9Q9NR96 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TLR9Q9NR96 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TLR9Q9NR96 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.64■□□□□ 0.89
TLR9Q9NR96 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR9Q9NR96 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR9Q9NR96 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR9Q9NR96 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TLR9Q9NR96 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 AL023973.1-201ENST00000624619 620 ntBASIC20.63■□□□□ 0.89
TLR9Q9NR96 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR9Q9NR96 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.63■□□□□ 0.89
TLR9Q9NR96 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR9Q9NR96 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TLR9Q9NR96 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TLR9Q9NR96 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TLR9Q9NR96 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TLR9Q9NR96 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms