Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 KRT8P8-201ENST00000434750 1448 ntBASIC18.12■□□□□ 0.49
MMP25Q9NPA2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MMP25Q9NPA2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.11■□□□□ 0.49
MMP25Q9NPA2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.1■□□□□ 0.49
MMP25Q9NPA2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 UNC93B2-201ENST00000285383 730 ntBASIC18.1■□□□□ 0.49
MMP25Q9NPA2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 AC211429.1-201ENST00000415277 523 ntBASIC18.1■□□□□ 0.49
MMP25Q9NPA2 RBM17P1-201ENST00000453646 1190 ntBASIC18.1■□□□□ 0.49
MMP25Q9NPA2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.1■□□□□ 0.49
MMP25Q9NPA2 AC131212.4-201ENST00000623606 975 ntBASIC18.1■□□□□ 0.49
MMP25Q9NPA2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MMP25Q9NPA2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 AC087499.1-201ENST00000418141 1075 ntBASIC18.09■□□□□ 0.49
MMP25Q9NPA2 AC004980.1-204ENST00000429707 299 ntBASIC18.09■□□□□ 0.49
MMP25Q9NPA2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 HLA-A-209ENST00000638375 975 ntBASIC18.09■□□□□ 0.49
MMP25Q9NPA2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MMP25Q9NPA2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms