Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 AC116562.4-201ENST00000641316 2276 ntBASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 AL353807.1-201ENST00000427475 662 ntBASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCNX3Q9H6A9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCNX3Q9H6A9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCNX3Q9H6A9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
PCNX3Q9H6A9 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.64■□□□□ 0.42
PCNX3Q9H6A9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 AC011506.1-201ENST00000474329 610 ntBASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 AC116562.2-201ENST00000507042 360 ntBASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCNX3Q9H6A9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 KSR1P1-201ENST00000446298 240 ntBASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 AF186192.3-201ENST00000583427 947 ntBASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 REXO1L10P-201ENST00000615707 1290 ntBASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 REXO1L12P-201ENST00000622156 912 ntBASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCNX3Q9H6A9 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 HTR7P1-201ENST00000538670 1336 ntBASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 AC113410.3-201ENST00000623366 203 ntBASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 CD177P1-201ENST00000606252 935 ntBASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.62■□□□□ 0.41
PCNX3Q9H6A9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.61■□□□□ 0.41
PCNX3Q9H6A9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms