Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.08■□□□□ 0.97
NUCKS1Q9H1E3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
NUCKS1Q9H1E3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
NUCKS1Q9H1E3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NUCKS1Q9H1E3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
NUCKS1Q9H1E3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.06■□□□□ 0.96
NUCKS1Q9H1E3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NUCKS1Q9H1E3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 RNA5SP413-201ENST00000516373 109 ntBASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 AC005829.2-201ENST00000571422 1056 ntBASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 AC093503.3-201ENST00000624917 2352 ntBASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 AIRN-201ENST00000601203 4374 ntBASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.04■□□□□ 0.96
NUCKS1Q9H1E3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.03■□□□□ 0.96
NUCKS1Q9H1E3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms