Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH11YQ9BZA8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH11YQ9BZA8 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
PCDH11YQ9BZA8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH11YQ9BZA8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PCDH11YQ9BZA8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH11YQ9BZA8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11YQ9BZA8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
PCDH11YQ9BZA8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11YQ9BZA8 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.33■■□□□ 1.64
PCDH11YQ9BZA8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC25.33■■□□□ 1.64
PCDH11YQ9BZA8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11YQ9BZA8 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11YQ9BZA8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11YQ9BZA8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
PCDH11YQ9BZA8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 KRT18P48-201ENST00000434763 852 ntBASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 PRSS44-201ENST00000515154 1146 ntBASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 AC116407.4-201ENST00000623319 1061 ntBASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11YQ9BZA8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 AP000523.1-201ENST00000398242 1049 ntBASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 AC093458.2-201ENST00000623150 629 ntBASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH11YQ9BZA8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 AL121894.2-201ENST00000602977 491 ntBASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11YQ9BZA8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 KRT8P11-201ENST00000409686 1436 ntBASIC25.29■■□□□ 1.64
PCDH11YQ9BZA8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 DUSP5P1-201ENST00000441325 1139 ntBASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11YQ9BZA8 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDH11YQ9BZA8 AC020907.5-201ENST00000624372 1936 ntBASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms