Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH11XQ9BZA7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH11XQ9BZA7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.33■■□□□ 1.65
PCDH11XQ9BZA7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH11XQ9BZA7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PCDH11XQ9BZA7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PCDH11XQ9BZA7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11XQ9BZA7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
PCDH11XQ9BZA7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11XQ9BZA7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC25.33■■□□□ 1.64
PCDH11XQ9BZA7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC25.33■■□□□ 1.64
PCDH11XQ9BZA7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11XQ9BZA7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11XQ9BZA7 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
PCDH11XQ9BZA7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
PCDH11XQ9BZA7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 KRT18P48-201ENST00000434763 852 ntBASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 PRSS44-201ENST00000515154 1146 ntBASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 AC116407.4-201ENST00000623319 1061 ntBASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PCDH11XQ9BZA7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 AP000523.1-201ENST00000398242 1049 ntBASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 AC093458.2-201ENST00000623150 629 ntBASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDH11XQ9BZA7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 AL121894.2-201ENST00000602977 491 ntBASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDH11XQ9BZA7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 KRT8P11-201ENST00000409686 1436 ntBASIC25.29■■□□□ 1.64
PCDH11XQ9BZA7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 DUSP5P1-201ENST00000441325 1139 ntBASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDH11XQ9BZA7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.27■■□□□ 1.64
PCDH11XQ9BZA7 AC020907.5-201ENST00000624372 1936 ntBASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms