Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 AC093525.10-201ENST00000625130 1569 ntBASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
KRTAP3-1Q9BYR8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 MIR638-201ENST00000385237 100 ntBASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF815P-204ENST00000434898 1737 ntBASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 AC116351.2-201ENST00000606540 1585 ntBASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
KRTAP3-1Q9BYR8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 AC079598.2-202ENST00000546624 1451 ntBASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 AL512353.2-201ENST00000448759 1962 ntBASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 DUX4L16-201ENST00000555130 1264 ntBASIC9.85□□□□□ -0.83
KRTAP3-1Q9BYR8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms