Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 AC133552.2-202ENST00000575694 574 ntBASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPPED1Q9BRF8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CPPED1Q9BRF8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 RARRES2P6-201ENST00000567333 442 ntBASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
CPPED1Q9BRF8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CPPED1Q9BRF8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.51
CPPED1Q9BRF8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CPPED1Q9BRF8 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CPPED1Q9BRF8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CPPED1Q9BRF8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 AL162430.1-201ENST00000480705 870 ntBASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 AC005829.2-201ENST00000571422 1056 ntBASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPPED1Q9BRF8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 MKRN4P-201ENST00000444706 1521 ntBASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPPED1Q9BRF8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms