Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC26.06■■□□□ 1.76
ABCA3Q99758 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
ABCA3Q99758 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC26.05■■□□□ 1.76
ABCA3Q99758 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC26.05■■□□□ 1.76
ABCA3Q99758 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC26.05■■□□□ 1.76
ABCA3Q99758 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
ABCA3Q99758 UNC93B7-201ENST00000509439 705 ntBASIC26.05■■□□□ 1.76
ABCA3Q99758 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA3Q99758 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.05■■□□□ 1.76
ABCA3Q99758 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA3Q99758 AC093525.10-201ENST00000625130 1569 ntBASIC26.05■■□□□ 1.76
ABCA3Q99758 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA3Q99758 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA3Q99758 AC006128.1-201ENST00000624704 1661 ntBASIC26.05■■□□□ 1.76
ABCA3Q99758 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA3Q99758 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC26.05■■□□□ 1.76
ABCA3Q99758 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA3Q99758 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA3Q99758 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ABCA3Q99758 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
ABCA3Q99758 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
ABCA3Q99758 NME1-207ENST00000480143 964 ntTSL 2 BASIC26.05■■□□□ 1.76
ABCA3Q99758 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC26.05■■□□□ 1.76
ABCA3Q99758 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC26.05■■□□□ 1.76
ABCA3Q99758 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
ABCA3Q99758 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.04■■□□□ 1.76
ABCA3Q99758 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA3Q99758 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC26.04■■□□□ 1.76
ABCA3Q99758 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
ABCA3Q99758 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA3Q99758 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA3Q99758 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA3Q99758 AL022342.1-201ENST00000400363 863 ntBASIC26.04■■□□□ 1.76
ABCA3Q99758 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC26.04■■□□□ 1.76
ABCA3Q99758 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC26.04■■□□□ 1.76
ABCA3Q99758 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA3Q99758 FEM1AP1-201ENST00000431297 1995 ntBASIC26.04■■□□□ 1.76
ABCA3Q99758 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA3Q99758 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
ABCA3Q99758 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ABCA3Q99758 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC26.03■■□□□ 1.76
ABCA3Q99758 AC092720.2-201ENST00000602388 1665 ntBASIC26.03■■□□□ 1.76
ABCA3Q99758 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
ABCA3Q99758 AP002383.4-201ENST00000442518 975 ntBASIC26.03■■□□□ 1.76
ABCA3Q99758 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC26.03■■□□□ 1.76
ABCA3Q99758 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC26.03■■□□□ 1.76
ABCA3Q99758 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 AC140113.3-201ENST00000605663 199 ntBASIC26.03■■□□□ 1.76
ABCA3Q99758 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
ABCA3Q99758 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
ABCA3Q99758 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
ABCA3Q99758 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC26.03■■□□□ 1.76
ABCA3Q99758 MOK-225ENST00000522867 1883 ntTSL 5 BASIC26.03■■□□□ 1.76
ABCA3Q99758 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA3Q99758 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA3Q99758 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC26.02■■□□□ 1.76
ABCA3Q99758 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA3Q99758 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
ABCA3Q99758 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA3Q99758 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.02■■□□□ 1.76
ABCA3Q99758 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA3Q99758 AC009078.2-202ENST00000463353 338 ntBASIC26.02■■□□□ 1.76
ABCA3Q99758 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA3Q99758 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
ABCA3Q99758 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA3Q99758 AC036111.1-201ENST00000533973 1582 ntBASIC26.02■■□□□ 1.76
ABCA3Q99758 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ABCA3Q99758 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC26.01■■□□□ 1.76
ABCA3Q99758 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC26.01■■□□□ 1.76
ABCA3Q99758 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
ABCA3Q99758 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ABCA3Q99758 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ABCA3Q99758 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ABCA3Q99758 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ABCA3Q99758 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
ABCA3Q99758 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ABCA3Q99758 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
ABCA3Q99758 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ABCA3Q99758 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC26■■□□□ 1.75
ABCA3Q99758 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ABCA3Q99758 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ABCA3Q99758 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC26■■□□□ 1.75
ABCA3Q99758 SLC25A6P4-201ENST00000586535 553 ntBASIC26■■□□□ 1.75
ABCA3Q99758 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC26■■□□□ 1.75
ABCA3Q99758 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
ABCA3Q99758 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC26■■□□□ 1.75
ABCA3Q99758 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26■■□□□ 1.75
ABCA3Q99758 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
ABCA3Q99758 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ABCA3Q99758 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC26■■□□□ 1.75
ABCA3Q99758 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC26■■□□□ 1.75
ABCA3Q99758 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms