Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.8■□□□□ 0.28
GFI1Q99684 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 AL354751.1-201ENST00000412768 1863 ntBASIC16.8■□□□□ 0.28
GFI1Q99684 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
GFI1Q99684 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GFI1Q99684 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.8■□□□□ 0.28
GFI1Q99684 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.8■□□□□ 0.28
GFI1Q99684 C2orf69P4-201ENST00000565394 541 ntBASIC16.8■□□□□ 0.28
GFI1Q99684 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
GFI1Q99684 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GFI1Q99684 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.8■□□□□ 0.28
GFI1Q99684 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GFI1Q99684 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
GFI1Q99684 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.8■□□□□ 0.28
GFI1Q99684 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GFI1Q99684 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
GFI1Q99684 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.79■□□□□ 0.28
GFI1Q99684 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.79■□□□□ 0.28
GFI1Q99684 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.79■□□□□ 0.28
GFI1Q99684 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.79■□□□□ 0.28
GFI1Q99684 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.79■□□□□ 0.28
GFI1Q99684 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.79■□□□□ 0.28
GFI1Q99684 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
GFI1Q99684 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
GFI1Q99684 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GFI1Q99684 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1Q99684 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1Q99684 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1Q99684 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.78■□□□□ 0.28
GFI1Q99684 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.78■□□□□ 0.28
GFI1Q99684 PCDHB18P-201ENST00000524813 2368 ntBASIC16.78■□□□□ 0.28
GFI1Q99684 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1Q99684 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1Q99684 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
GFI1Q99684 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.78■□□□□ 0.28
GFI1Q99684 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.78■□□□□ 0.28
GFI1Q99684 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.78■□□□□ 0.28
GFI1Q99684 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.78■□□□□ 0.28
GFI1Q99684 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.78■□□□□ 0.28
GFI1Q99684 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1Q99684 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1Q99684 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1Q99684 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
GFI1Q99684 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.78■□□□□ 0.28
GFI1Q99684 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.78■□□□□ 0.28
GFI1Q99684 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
GFI1Q99684 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 NOC2LP1-202ENST00000452600 2235 ntBASIC16.77■□□□□ 0.28
GFI1Q99684 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.77■□□□□ 0.28
GFI1Q99684 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.77■□□□□ 0.28
GFI1Q99684 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.77■□□□□ 0.28
GFI1Q99684 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
GFI1Q99684 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
GFI1Q99684 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.77■□□□□ 0.28
GFI1Q99684 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
GFI1Q99684 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
GFI1Q99684 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.77■□□□□ 0.28
GFI1Q99684 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
GFI1Q99684 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.77■□□□□ 0.27
GFI1Q99684 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.77■□□□□ 0.27
GFI1Q99684 SDHAP1-207ENST00000440850 2000 ntBASIC16.77■□□□□ 0.27
GFI1Q99684 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.77■□□□□ 0.27
GFI1Q99684 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.77■□□□□ 0.27
GFI1Q99684 TFP1-202ENST00000475455 1573 ntBASIC16.77■□□□□ 0.27
GFI1Q99684 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
GFI1Q99684 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms