Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDHB18PQ96TA0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB18PQ96TA0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB18PQ96TA0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB18PQ96TA0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB18PQ96TA0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDHB18PQ96TA0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.64■□□□□ 0.9
PCDHB18PQ96TA0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 AC233263.1-201ENST00000578059 224 ntBASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 LINC01465-201ENST00000408887 1940 ntBASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PCDHB18PQ96TA0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHB18PQ96TA0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHB18PQ96TA0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 AP003097.1-201ENST00000530657 1135 ntBASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 AL049812.1-201ENST00000432563 2267 ntBASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDHB18PQ96TA0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms