Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC32.41■■■□□ 2.78
IFT140Q96RY7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
IFT140Q96RY7 AL662844.1-201ENST00000546340 181 ntBASIC32.41■■■□□ 2.78
IFT140Q96RY7 Z98882.1-201ENST00000622160 2253 ntBASIC32.4■■■□□ 2.78
IFT140Q96RY7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC32.4■■■□□ 2.78
IFT140Q96RY7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC32.4■■■□□ 2.78
IFT140Q96RY7 GUSBP5-202ENST00000510805 1989 ntBASIC32.4■■■□□ 2.78
IFT140Q96RY7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC32.4■■■□□ 2.78
IFT140Q96RY7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
IFT140Q96RY7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
IFT140Q96RY7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC32.4■■■□□ 2.78
IFT140Q96RY7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
IFT140Q96RY7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
IFT140Q96RY7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
IFT140Q96RY7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC32.39■■■□□ 2.78
IFT140Q96RY7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
IFT140Q96RY7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
IFT140Q96RY7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
IFT140Q96RY7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC32.39■■■□□ 2.78
IFT140Q96RY7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
IFT140Q96RY7 MRPL3P1-201ENST00000400109 1033 ntBASIC32.39■■■□□ 2.78
IFT140Q96RY7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC32.39■■■□□ 2.78
IFT140Q96RY7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC32.39■■■□□ 2.78
IFT140Q96RY7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC32.39■■■□□ 2.78
IFT140Q96RY7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC32.39■■■□□ 2.78
IFT140Q96RY7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC32.39■■■□□ 2.78
IFT140Q96RY7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC32.39■■■□□ 2.78
IFT140Q96RY7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
IFT140Q96RY7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
IFT140Q96RY7 LINC01465-201ENST00000408887 1940 ntBASIC32.39■■■□□ 2.78
IFT140Q96RY7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC32.39■■■□□ 2.78
IFT140Q96RY7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
IFT140Q96RY7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC32.39■■■□□ 2.77
IFT140Q96RY7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
IFT140Q96RY7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
IFT140Q96RY7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
IFT140Q96RY7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
IFT140Q96RY7 DRAXINP1-201ENST00000437611 948 ntBASIC32.38■■■□□ 2.77
IFT140Q96RY7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
IFT140Q96RY7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
IFT140Q96RY7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
IFT140Q96RY7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
IFT140Q96RY7 AL024507.2-201ENST00000606070 2574 ntBASIC32.37■■■□□ 2.77
IFT140Q96RY7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
IFT140Q96RY7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
IFT140Q96RY7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
IFT140Q96RY7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC32.37■■■□□ 2.77
IFT140Q96RY7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC32.37■■■□□ 2.77
IFT140Q96RY7 AC120114.3-201ENST00000611923 658 ntBASIC32.37■■■□□ 2.77
IFT140Q96RY7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC32.37■■■□□ 2.77
IFT140Q96RY7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC32.37■■■□□ 2.77
IFT140Q96RY7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
IFT140Q96RY7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
IFT140Q96RY7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.77
IFT140Q96RY7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
IFT140Q96RY7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC32.36■■■□□ 2.77
IFT140Q96RY7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC32.36■■■□□ 2.77
IFT140Q96RY7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC32.36■■■□□ 2.77
IFT140Q96RY7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
IFT140Q96RY7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC32.36■■■□□ 2.77
IFT140Q96RY7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC32.36■■■□□ 2.77
IFT140Q96RY7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
IFT140Q96RY7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
IFT140Q96RY7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
IFT140Q96RY7 AL162741.1-201ENST00000565563 1558 ntBASIC32.36■■■□□ 2.77
IFT140Q96RY7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
IFT140Q96RY7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC32.35■■■□□ 2.77
IFT140Q96RY7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
IFT140Q96RY7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
IFT140Q96RY7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
IFT140Q96RY7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
IFT140Q96RY7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
IFT140Q96RY7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
IFT140Q96RY7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
IFT140Q96RY7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC32.35■■■□□ 2.77
IFT140Q96RY7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC32.35■■■□□ 2.77
IFT140Q96RY7 AL121772.3-201ENST00000610840 674 ntBASIC32.35■■■□□ 2.77
IFT140Q96RY7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
IFT140Q96RY7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC32.34■■■□□ 2.77
IFT140Q96RY7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
IFT140Q96RY7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC32.34■■■□□ 2.77
IFT140Q96RY7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
IFT140Q96RY7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
IFT140Q96RY7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC32.34■■■□□ 2.77
IFT140Q96RY7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
IFT140Q96RY7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
IFT140Q96RY7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
IFT140Q96RY7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC32.34■■■□□ 2.77
IFT140Q96RY7 AC012615.1-201ENST00000565797 1299 ntBASIC32.34■■■□□ 2.77
IFT140Q96RY7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms