Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.02■□□□□ 0.64
PCDH15Q96QU1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
PCDH15Q96QU1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH15Q96QU1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PCDH15Q96QU1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 AC092720.2-201ENST00000602388 1665 ntBASIC19.01■□□□□ 0.63
PCDH15Q96QU1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 AC012313.10-201ENST00000623509 926 ntBASIC19.01■□□□□ 0.63
PCDH15Q96QU1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
PCDH15Q96QU1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19■□□□□ 0.63
PCDH15Q96QU1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19■□□□□ 0.63
PCDH15Q96QU1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH15Q96QU1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PCDH15Q96QU1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH15Q96QU1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19■□□□□ 0.63
PCDH15Q96QU1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19■□□□□ 0.63
PCDH15Q96QU1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDH15Q96QU1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19■□□□□ 0.63
PCDH15Q96QU1 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19■□□□□ 0.63
PCDH15Q96QU1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19■□□□□ 0.63
PCDH15Q96QU1 ZNF444P1-201ENST00000559497 298 ntBASIC19■□□□□ 0.63
PCDH15Q96QU1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PCDH15Q96QU1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19■□□□□ 0.63
PCDH15Q96QU1 KRT8P41-201ENST00000533985 1514 ntBASIC19■□□□□ 0.63
PCDH15Q96QU1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDH15Q96QU1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDH15Q96QU1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDH15Q96QU1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PCDH15Q96QU1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 AL160286.2-201ENST00000567150 934 ntBASIC18.99■□□□□ 0.63
PCDH15Q96QU1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 PRSS44-201ENST00000515154 1146 ntBASIC18.99■□□□□ 0.63
PCDH15Q96QU1 VENTXP5-201ENST00000523979 775 ntBASIC18.99■□□□□ 0.63
PCDH15Q96QU1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDH15Q96QU1 HYMAI.1-201ENST00000620949 238 ntBASIC18.99■□□□□ 0.63
PCDH15Q96QU1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDH15Q96QU1 AC026396.1-201ENST00000419388 421 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms