Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
DUX3Q96PT4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.14■□□□□ 0.01
DUX3Q96PT4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX3Q96PT4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX3Q96PT4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX3Q96PT4 AP005212.1-201ENST00000581547 1997 ntBASIC15.13■□□□□ 0.01
DUX3Q96PT4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX3Q96PT4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX3Q96PT4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX3Q96PT4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX3Q96PT4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX3Q96PT4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX3Q96PT4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.13■□□□□ 0.01
DUX3Q96PT4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 AC087499.1-201ENST00000418141 1075 ntBASIC15.12■□□□□ 0.01
DUX3Q96PT4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.12■□□□□ 0.01
DUX3Q96PT4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX3Q96PT4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
DUX3Q96PT4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 PCDHAC2-203ENST00000615316 3011 ntBASIC15.11■□□□□ 0.01
DUX3Q96PT4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 NIFKP9-201ENST00000419265 221 ntBASIC15.11■□□□□ 0.01
DUX3Q96PT4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 LINC01006-201ENST00000333319 2292 ntBASIC15.11■□□□□ 0.01
DUX3Q96PT4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.11■□□□□ 0.01
DUX3Q96PT4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
DUX3Q96PT4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms