Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 KSR1P1-201ENST00000446298 240 ntBASIC21.67■■□□□ 1.06
SCLT1Q96NL6 C1QL1P1-201ENST00000568105 661 ntBASIC21.67■■□□□ 1.06
SCLT1Q96NL6 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 LINC01023-201ENST00000606054 436 ntBASIC21.67■■□□□ 1.06
SCLT1Q96NL6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCLT1Q96NL6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.66■■□□□ 1.06
SCLT1Q96NL6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 NUDT16P1-203ENST00000513809 620 ntBASIC21.66■■□□□ 1.06
SCLT1Q96NL6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 AC133561.5-201ENST00000635547 218 ntBASIC21.66■■□□□ 1.06
SCLT1Q96NL6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCLT1Q96NL6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.65■■□□□ 1.06
SCLT1Q96NL6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SCLT1Q96NL6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SCLT1Q96NL6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCLT1Q96NL6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCLT1Q96NL6 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.64■■□□□ 1.06
SCLT1Q96NL6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
SCLT1Q96NL6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCLT1Q96NL6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCLT1Q96NL6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 AC087499.1-201ENST00000418141 1075 ntBASIC21.64■■□□□ 1.05
SCLT1Q96NL6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCLT1Q96NL6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.63■■□□□ 1.05
SCLT1Q96NL6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SCLT1Q96NL6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SCLT1Q96NL6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCLT1Q96NL6 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCLT1Q96NL6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCLT1Q96NL6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCLT1Q96NL6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.63■■□□□ 1.05
SCLT1Q96NL6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms