Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 AC113347.1-201ENST00000413321 391 ntBASIC15.84■□□□□ 0.13
ZNF48Q96MX3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 YBX1P10-201ENST00000444752 975 ntBASIC15.84■□□□□ 0.13
ZNF48Q96MX3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 AL445675.2-201ENST00000620291 557 ntBASIC15.84■□□□□ 0.13
ZNF48Q96MX3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC15.84■□□□□ 0.13
ZNF48Q96MX3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF48Q96MX3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF48Q96MX3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF48Q96MX3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF48Q96MX3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF48Q96MX3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZNF48Q96MX3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 KRT18P16-201ENST00000510337 1294 ntBASIC15.83■□□□□ 0.12
ZNF48Q96MX3 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZNF48Q96MX3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 AL049597.2-201ENST00000565575 961 ntBASIC15.82■□□□□ 0.12
ZNF48Q96MX3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 FSCN1P1-201ENST00000568912 1481 ntBASIC15.82■□□□□ 0.12
ZNF48Q96MX3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZNF48Q96MX3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 TERF1P1-201ENST00000311003 1181 ntBASIC15.81■□□□□ 0.12
ZNF48Q96MX3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 KRT18P22-201ENST00000402024 1347 ntBASIC15.81■□□□□ 0.12
ZNF48Q96MX3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 AC004980.1-204ENST00000429707 299 ntBASIC15.81■□□□□ 0.12
ZNF48Q96MX3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 TUBB8P6-201ENST00000436895 1288 ntBASIC15.81■□□□□ 0.12
ZNF48Q96MX3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZNF48Q96MX3 B3GAT3P1-201ENST00000471720 806 ntBASIC15.81■□□□□ 0.12
ZNF48Q96MX3 AC011506.1-201ENST00000474329 610 ntBASIC15.81■□□□□ 0.12
ZNF48Q96MX3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms