Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 WIZP1-201ENST00000531444 2299 ntBASIC14.86□□□□□ -0.03
LINC00479Q96M42 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.86□□□□□ -0.03
LINC00479Q96M42 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00479Q96M42 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 AC027612.3-201ENST00000413684 1047 ntBASIC14.85□□□□□ -0.03
LINC00479Q96M42 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 TERF1P2-201ENST00000583350 1212 ntBASIC14.85□□□□□ -0.03
LINC00479Q96M42 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
LINC00479Q96M42 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00479Q96M42 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00479Q96M42 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00479Q96M42 TEX21P-204ENST00000641479 1693 ntBASIC14.84□□□□□ -0.03
LINC00479Q96M42 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00479Q96M42 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
LINC00479Q96M42 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00479Q96M42 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00479Q96M42 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00479Q96M42 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.84□□□□□ -0.03
LINC00479Q96M42 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.84□□□□□ -0.03
LINC00479Q96M42 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00479Q96M42 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00479Q96M42 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00479Q96M42 PHGDH-210ENST00000641115 1638 ntBASIC14.84□□□□□ -0.03
LINC00479Q96M42 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00479Q96M42 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00479Q96M42 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00479Q96M42 AC004854.2-201ENST00000608450 1441 ntBASIC14.83□□□□□ -0.03
LINC00479Q96M42 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LINC00479Q96M42 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00479Q96M42 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.83□□□□□ -0.03
LINC00479Q96M42 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.83□□□□□ -0.03
LINC00479Q96M42 AC090340.1-201ENST00000620778 4980 ntBASIC14.83□□□□□ -0.03
LINC00479Q96M42 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00479Q96M42 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00479Q96M42 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00479Q96M42 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00479Q96M42 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00479Q96M42 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 AC090164.3-201ENST00000610780 2143 ntBASIC14.83□□□□□ -0.04
LINC00479Q96M42 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LINC00479Q96M42 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LINC00479Q96M42 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms