Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PDLIM5Q96HC4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 AC141586.3-201ENST00000562166 1838 ntBASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 MTDHP1-201ENST00000605323 784 ntBASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PDLIM5Q96HC4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDLIM5Q96HC4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.02■□□□□ 0.63
PDLIM5Q96HC4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDLIM5Q96HC4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDLIM5Q96HC4 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.02■□□□□ 0.63
PDLIM5Q96HC4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
PDLIM5Q96HC4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
PDLIM5Q96HC4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 NBPF21P-201ENST00000425093 1451 ntBASIC19■□□□□ 0.63
PDLIM5Q96HC4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 LINC01465-201ENST00000408887 1940 ntBASIC19■□□□□ 0.63
PDLIM5Q96HC4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19■□□□□ 0.63
PDLIM5Q96HC4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19■□□□□ 0.63
PDLIM5Q96HC4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 AC098818.2-201ENST00000564925 2320 ntBASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 AC069544.1-201ENST00000609399 999 ntBASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 AP000974.1-201ENST00000623909 2387 ntBASIC18.99■□□□□ 0.63
PDLIM5Q96HC4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms