Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.35■□□□□ 0.21
TIMD4Q96H15 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMD4Q96H15 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMD4Q96H15 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.35■□□□□ 0.21
TIMD4Q96H15 LINC01023-201ENST00000606054 436 ntBASIC16.35■□□□□ 0.21
TIMD4Q96H15 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TIMD4Q96H15 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMD4Q96H15 AL162377.1-201ENST00000618844 1793 ntBASIC16.35■□□□□ 0.21
TIMD4Q96H15 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.35■□□□□ 0.21
TIMD4Q96H15 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.35■□□□□ 0.21
TIMD4Q96H15 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TIMD4Q96H15 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
TIMD4Q96H15 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TIMD4Q96H15 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 REXO1L10P-201ENST00000615707 1290 ntBASIC16.34■□□□□ 0.21
TIMD4Q96H15 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.34■□□□□ 0.21
TIMD4Q96H15 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TIMD4Q96H15 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMD4Q96H15 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMD4Q96H15 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TIMD4Q96H15 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMD4Q96H15 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TIMD4Q96H15 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TIMD4Q96H15 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMD4Q96H15 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TIMD4Q96H15 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 MMP23A-201ENST00000234610 1017 ntBASIC16.33■□□□□ 0.2
TIMD4Q96H15 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 AC116562.2-201ENST00000507042 360 ntBASIC16.33■□□□□ 0.2
TIMD4Q96H15 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TIMD4Q96H15 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TIMD4Q96H15 EFS-203ENST00000429593 2610 ntTSL 2 BASIC16.32■□□□□ 0.2
TIMD4Q96H15 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TIMD4Q96H15 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.32■□□□□ 0.2
TIMD4Q96H15 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TIMD4Q96H15 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TIMD4Q96H15 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
TIMD4Q96H15 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms