Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 AC120498.8-201ENST00000614275 531 ntBASIC20.02■□□□□ 0.8
IFT43Q96FT9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.02■□□□□ 0.8
IFT43Q96FT9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
IFT43Q96FT9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IFT43Q96FT9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
IFT43Q96FT9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.02■□□□□ 0.79
IFT43Q96FT9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
IFT43Q96FT9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IFT43Q96FT9 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
IFT43Q96FT9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
IFT43Q96FT9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFT43Q96FT9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFT43Q96FT9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFT43Q96FT9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFT43Q96FT9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFT43Q96FT9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IFT43Q96FT9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFT43Q96FT9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 AC233263.1-201ENST00000578059 224 ntBASIC20.01■□□□□ 0.79
IFT43Q96FT9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IFT43Q96FT9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
IFT43Q96FT9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFT43Q96FT9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFT43Q96FT9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
IFT43Q96FT9 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IFT43Q96FT9 AC009237.14-201ENST00000609975 1594 ntBASIC20■□□□□ 0.79
IFT43Q96FT9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20■□□□□ 0.79
IFT43Q96FT9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
IFT43Q96FT9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20■□□□□ 0.79
IFT43Q96FT9 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20■□□□□ 0.79
IFT43Q96FT9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20■□□□□ 0.79
IFT43Q96FT9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20■□□□□ 0.79
IFT43Q96FT9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20■□□□□ 0.79
IFT43Q96FT9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20■□□□□ 0.79
IFT43Q96FT9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20■□□□□ 0.79
IFT43Q96FT9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFT43Q96FT9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFT43Q96FT9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20■□□□□ 0.79
IFT43Q96FT9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20■□□□□ 0.79
IFT43Q96FT9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20■□□□□ 0.79
IFT43Q96FT9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20■□□□□ 0.79
IFT43Q96FT9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20■□□□□ 0.79
IFT43Q96FT9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
IFT43Q96FT9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 AC018553.1-201ENST00000616682 1458 ntBASIC19.99■□□□□ 0.79
IFT43Q96FT9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
IFT43Q96FT9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
IFT43Q96FT9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
IFT43Q96FT9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.99■□□□□ 0.79
IFT43Q96FT9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 AC133681.1-201ENST00000465482 601 ntBASIC19.99■□□□□ 0.79
IFT43Q96FT9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.99■□□□□ 0.79
IFT43Q96FT9 MTDHP1-201ENST00000605323 784 ntBASIC19.99■□□□□ 0.79
IFT43Q96FT9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.99■□□□□ 0.79
IFT43Q96FT9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
IFT43Q96FT9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IFT43Q96FT9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.99■□□□□ 0.79
IFT43Q96FT9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
IFT43Q96FT9 AC124283.5-201ENST00000624661 1809 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms