Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 AC131212.4-201ENST00000623606 975 ntBASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ECHDC3Q96DC8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 AP003071.4-201ENST00000562276 1284 ntBASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ECHDC3Q96DC8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 MESTP1-201ENST00000404287 994 ntBASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 AL355355.2-201ENST00000442321 338 ntBASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 Z85996.1-201ENST00000494644 937 ntBASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 REXO1L10P-201ENST00000615707 1290 ntBASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 REXO1L12P-201ENST00000622156 912 ntBASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ECHDC3Q96DC8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 AL160286.2-201ENST00000567150 934 ntBASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.48■□□□□ 0.71
ECHDC3Q96DC8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms