Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM43Q96BQ3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 MIR3180-1-201ENST00000580374 94 ntBASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 MIR3180-3-201ENST00000584616 94 ntBASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TRIM43Q96BQ3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 AL645929.1-201ENST00000420084 975 ntBASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 AC006538.3-201ENST00000612495 578 ntBASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM43Q96BQ3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 FAAHP1-202ENST00000446499 1238 ntBASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 AC023511.2-201ENST00000618803 211 ntBASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRIM43Q96BQ3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 AC009078.2-202ENST00000463353 338 ntBASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 AC092597.1-201ENST00000487352 616 ntBASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 AC004263.2-201ENST00000617183 678 ntBASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 FEM1AP4-201ENST00000443167 1987 ntBASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM43Q96BQ3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 AC016734.2-201ENST00000624325 1377 ntBASIC21.15■□□□□ 0.98
TRIM43Q96BQ3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms