Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.17■□□□□ 0.82
ATG4AQ8WYN0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATG4AQ8WYN0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATG4AQ8WYN0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATG4AQ8WYN0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ATG4AQ8WYN0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ATG4AQ8WYN0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ATG4AQ8WYN0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATG4AQ8WYN0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.17■□□□□ 0.82
ATG4AQ8WYN0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 AL390719.1-204ENST00000412397 1219 ntBASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.16■□□□□ 0.82
ATG4AQ8WYN0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ATG4AQ8WYN0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.14■□□□□ 0.82
ATG4AQ8WYN0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
ATG4AQ8WYN0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 AC073210.2-201ENST00000430369 194 ntBASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 AC083906.2-201ENST00000511578 360 ntBASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 NEFHP1-201ENST00000412845 2629 ntBASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
ATG4AQ8WYN0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 ZNF815P-204ENST00000434898 1737 ntBASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ATG4AQ8WYN0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms