Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD6Q8TD26 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHD6Q8TD26 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.66■□□□□ 0.42
CHD6Q8TD26 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD6Q8TD26 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD6Q8TD26 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD6Q8TD26 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD6Q8TD26 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD6Q8TD26 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHD6Q8TD26 ZNF259P1-201ENST00000407656 1365 ntBASIC17.65■□□□□ 0.42
CHD6Q8TD26 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 AC106028.4-201ENST00000614509 607 ntBASIC17.65■□□□□ 0.42
CHD6Q8TD26 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD6Q8TD26 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHD6Q8TD26 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.65■□□□□ 0.42
CHD6Q8TD26 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.64■□□□□ 0.42
CHD6Q8TD26 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHD6Q8TD26 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHD6Q8TD26 MIR662-201ENST00000384847 95 ntBASIC17.64■□□□□ 0.42
CHD6Q8TD26 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.64■□□□□ 0.42
CHD6Q8TD26 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.64■□□□□ 0.42
CHD6Q8TD26 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CHD6Q8TD26 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.64■□□□□ 0.42
CHD6Q8TD26 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.64■□□□□ 0.42
CHD6Q8TD26 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHD6Q8TD26 FAM197Y3-203ENST00000618346 717 ntBASIC17.64■□□□□ 0.42
CHD6Q8TD26 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CHD6Q8TD26 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHD6Q8TD26 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD6Q8TD26 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD6Q8TD26 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHD6Q8TD26 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHD6Q8TD26 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.64■□□□□ 0.41
CHD6Q8TD26 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.64■□□□□ 0.41
CHD6Q8TD26 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD6Q8TD26 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD6Q8TD26 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CHD6Q8TD26 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHD6Q8TD26 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHD6Q8TD26 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHD6Q8TD26 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.64■□□□□ 0.41
CHD6Q8TD26 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 AC093323.1-202ENST00000635031 2045 ntBASIC17.63■□□□□ 0.41
CHD6Q8TD26 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.63■□□□□ 0.41
CHD6Q8TD26 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHD6Q8TD26 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHD6Q8TD26 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD6Q8TD26 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD6Q8TD26 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.62■□□□□ 0.41
CHD6Q8TD26 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD6Q8TD26 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.62■□□□□ 0.41
CHD6Q8TD26 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHD6Q8TD26 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHD6Q8TD26 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.62■□□□□ 0.41
CHD6Q8TD26 LINC01124-201ENST00000409786 2117 ntBASIC17.62■□□□□ 0.41
CHD6Q8TD26 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD6Q8TD26 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.62■□□□□ 0.41
CHD6Q8TD26 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD6Q8TD26 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHD6Q8TD26 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms