Protein–RNA interactions for Protein: Q8TAT5

NEIL3, Endonuclease 8-like 3, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3Q8TAT5 AL121829.2-201ENST00000620908 328 ntBASIC18.06■□□□□ 0.48
NEIL3Q8TAT5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEIL3Q8TAT5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEIL3Q8TAT5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEIL3Q8TAT5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.06■□□□□ 0.48
NEIL3Q8TAT5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.06■□□□□ 0.48
NEIL3Q8TAT5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEIL3Q8TAT5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 KRASP1-201ENST00000407852 552 ntBASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 AC110285.5-201ENST00000611501 352 ntBASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 AL158211.5-201ENST00000623583 2518 ntBASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NEIL3Q8TAT5 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 AP000974.1-201ENST00000623909 2387 ntBASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.04■□□□□ 0.48
NEIL3Q8TAT5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 AC125437.2-201ENST00000625180 2167 ntBASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 AL121906.2-201ENST00000621597 723 ntBASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEIL3Q8TAT5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 AC124283.5-201ENST00000624661 1809 ntBASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 AL596275.1-201ENST00000423464 877 ntBASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.02■□□□□ 0.48
NEIL3Q8TAT5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms