Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 AL137013.1-201ENST00000432946 1228 ntBASIC21.08■□□□□ 0.97
VPS52Q8N1B4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VPS52Q8N1B4 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS52Q8N1B4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.08■□□□□ 0.96
VPS52Q8N1B4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS52Q8N1B4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS52Q8N1B4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS52Q8N1B4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS52Q8N1B4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
VPS52Q8N1B4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
VPS52Q8N1B4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 AC116351.2-201ENST00000606540 1585 ntBASIC21.07■□□□□ 0.96
VPS52Q8N1B4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 TERF1P1-201ENST00000311003 1181 ntBASIC21.07■□□□□ 0.96
VPS52Q8N1B4 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.07■□□□□ 0.96
VPS52Q8N1B4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 AL445675.2-201ENST00000620291 557 ntBASIC21.07■□□□□ 0.96
VPS52Q8N1B4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
VPS52Q8N1B4 FSCN1P1-201ENST00000568912 1481 ntBASIC21.07■□□□□ 0.96
VPS52Q8N1B4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 SLC25A3P1-201ENST00000443844 931 ntBASIC21.06■□□□□ 0.96
VPS52Q8N1B4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VPS52Q8N1B4 AC138932.1-201ENST00000534164 6830 ntBASIC21.06■□□□□ 0.96
VPS52Q8N1B4 KRT16P6-202ENST00000425692 1426 ntBASIC21.05■□□□□ 0.96
VPS52Q8N1B4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 MESTP1-201ENST00000404287 994 ntBASIC21.05■□□□□ 0.96
VPS52Q8N1B4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.05■□□□□ 0.96
VPS52Q8N1B4 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.05■□□□□ 0.96
VPS52Q8N1B4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 TFP1-202ENST00000475455 1573 ntBASIC21.05■□□□□ 0.96
VPS52Q8N1B4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VPS52Q8N1B4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
VPS52Q8N1B4 AC026271.3-201ENST00000571884 352 ntBASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms