Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC099778.1-201ENST00000568593 1911 ntBASIC21.72■■□□□ 1.07
TRIM50Q86XT4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 LINC01006-201ENST00000333319 2292 ntBASIC21.72■■□□□ 1.07
TRIM50Q86XT4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 AC004951.3-201ENST00000418645 1148 ntBASIC21.72■■□□□ 1.07
TRIM50Q86XT4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 AP000692.2-201ENST00000608391 879 ntBASIC21.72■■□□□ 1.07
TRIM50Q86XT4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM50Q86XT4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 AC091390.4-202ENST00000476426 537 ntBASIC21.71■■□□□ 1.07
TRIM50Q86XT4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 AC010203.1-204ENST00000548782 407 ntBASIC21.71■■□□□ 1.07
TRIM50Q86XT4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 C2orf69P3-201ENST00000565542 1120 ntBASIC21.71■■□□□ 1.07
TRIM50Q86XT4 AL445228.2-201ENST00000605589 952 ntBASIC21.71■■□□□ 1.07
TRIM50Q86XT4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM50Q86XT4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.7■■□□□ 1.07
TRIM50Q86XT4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TRIM50Q86XT4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
TRIM50Q86XT4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 ECEL1P2-202ENST00000465689 757 ntBASIC21.7■■□□□ 1.06
TRIM50Q86XT4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 AC073508.3-201ENST00000619697 1419 ntBASIC21.7■■□□□ 1.06
TRIM50Q86XT4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM50Q86XT4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 AL137013.1-201ENST00000432946 1228 ntBASIC21.69■■□□□ 1.06
TRIM50Q86XT4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 AC112907.3-201ENST00000577781 2400 ntBASIC21.69■■□□□ 1.06
TRIM50Q86XT4 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM50Q86XT4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 MFAP1P1-201ENST00000442257 1255 ntBASIC21.68■■□□□ 1.06
TRIM50Q86XT4 FAM207BP-201ENST00000447172 505 ntBASIC21.68■■□□□ 1.06
TRIM50Q86XT4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM50Q86XT4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms