Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LRRTM1Q86UE6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 MIR638-201ENST00000385237 100 ntBASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 CNN2P6-201ENST00000439038 900 ntBASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
LRRTM1Q86UE6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 AL355472.2-201ENST00000422958 438 ntBASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 C2orf69P4-201ENST00000565394 541 ntBASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LRRTM1Q86UE6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 AC116351.2-201ENST00000606540 1585 ntBASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 NTF6G-201ENST00000591094 616 ntBASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 AL031598.1-201ENST00000561511 1773 ntBASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRRTM1Q86UE6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms