Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
NIPAL3Q6P499 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NIPAL3Q6P499 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 SOX15-203ENST00000570788 1093 ntBASIC17.69■□□□□ 0.42
NIPAL3Q6P499 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NIPAL3Q6P499 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.68■□□□□ 0.42
NIPAL3Q6P499 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 LINC01465-201ENST00000408887 1940 ntBASIC17.68■□□□□ 0.42
NIPAL3Q6P499 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPAL3Q6P499 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.67■□□□□ 0.42
NIPAL3Q6P499 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms