Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 LSM12P1-201ENST00000411836 588 ntBASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 NCF1B-203ENST00000435988 1254 ntBASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.77■□□□□ 0.44
TMEM53Q6P2H8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM53Q6P2H8 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.77■□□□□ 0.43
TMEM53Q6P2H8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM53Q6P2H8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.77■□□□□ 0.43
TMEM53Q6P2H8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM53Q6P2H8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.77■□□□□ 0.43
TMEM53Q6P2H8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TMEM53Q6P2H8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
TMEM53Q6P2H8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM53Q6P2H8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 AC138932.1-201ENST00000534164 6830 ntBASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 AL355472.2-201ENST00000422958 438 ntBASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEM53Q6P2H8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 AC092720.2-201ENST00000602388 1665 ntBASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 AC105020.6-201ENST00000621523 1217 ntBASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEM53Q6P2H8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEM53Q6P2H8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms