Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LYSMD4Q5XG99 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LYSMD4Q5XG99 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 KRT18P38-201ENST00000449496 1282 ntBASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 KRT8P45-201ENST00000414328 1447 ntBASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 AP001271.2-201ENST00000624018 1556 ntBASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD4Q5XG99 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 AC079834.2-201ENST00000609776 1949 ntBASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 BX119927.1-201ENST00000636596 1552 ntBASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 LINC01465-201ENST00000408887 1940 ntBASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD4Q5XG99 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 AL136038.3-201ENST00000561909 1096 ntBASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 CLEC4GP1-201ENST00000596555 870 ntBASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD4Q5XG99 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 AC026396.1-201ENST00000419388 421 ntBASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD4Q5XG99 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 KRT8P41-201ENST00000533985 1514 ntBASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LYSMD4Q5XG99 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms