Protein–RNA interactions for Protein: Q5VZK9

CARMIL1, F-actin-uncapping protein LRRC16A, humanhuman

Predictions only

Length 1,371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL1Q5VZK9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 HYMAI.1-201ENST00000620949 238 ntBASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
CARMIL1Q5VZK9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC31.67■■■□□ 2.66
CARMIL1Q5VZK9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 GOLGA2P11-201ENST00000562660 1621 ntBASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC31.66■■■□□ 2.66
CARMIL1Q5VZK9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC31.65■■■□□ 2.66
CARMIL1Q5VZK9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC31.64■■■□□ 2.66
CARMIL1Q5VZK9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
CARMIL1Q5VZK9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC31.64■■■□□ 2.66
CARMIL1Q5VZK9 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CARMIL1Q5VZK9 AL136038.3-201ENST00000561909 1096 ntBASIC31.64■■■□□ 2.66
CARMIL1Q5VZK9 AC093458.2-201ENST00000623150 629 ntBASIC31.64■■■□□ 2.66
CARMIL1Q5VZK9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC31.64■■■□□ 2.66
CARMIL1Q5VZK9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 AC140113.3-201ENST00000605663 199 ntBASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CARMIL1Q5VZK9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 AC020907.5-201ENST00000624372 1936 ntBASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC31.62■■■□□ 2.65
CARMIL1Q5VZK9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
CARMIL1Q5VZK9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CARMIL1Q5VZK9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CARMIL1Q5VZK9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CARMIL1Q5VZK9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CARMIL1Q5VZK9 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC31.61■■■□□ 2.65
CARMIL1Q5VZK9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC31.61■■■□□ 2.65
CARMIL1Q5VZK9 NEK4P2-201ENST00000580004 1012 ntBASIC31.61■■■□□ 2.65
CARMIL1Q5VZK9 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CARMIL1Q5VZK9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
CARMIL1Q5VZK9 AC112907.2-201ENST00000448639 330 ntBASIC31.6■■■□□ 2.65
CARMIL1Q5VZK9 MIR4674-201ENST00000582457 87 ntBASIC31.6■■■□□ 2.65
CARMIL1Q5VZK9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC31.6■■■□□ 2.65
CARMIL1Q5VZK9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms