Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 PTBP1P-201ENST00000554374 1601 ntBASIC14.88□□□□□ -0.03
HIST1H1AQ02539 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HIST1H1AQ02539 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 ISCU-212ENST00000547005 795 ntTSL 3 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HIST1H1AQ02539 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 AC004911.1-201ENST00000416316 871 ntBASIC14.86□□□□□ -0.03
HIST1H1AQ02539 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 AC093787.1-201ENST00000450396 207 ntBASIC14.86□□□□□ -0.03
HIST1H1AQ02539 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
HIST1H1AQ02539 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 LSM12P1-201ENST00000411836 588 ntBASIC14.85□□□□□ -0.03
HIST1H1AQ02539 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.85□□□□□ -0.03
HIST1H1AQ02539 AL137784.2-201ENST00000607332 1000 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms