Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PRKDCP78527 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKDCP78527 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKDCP78527 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.15□□□□□ -0.14
PRKDCP78527 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKDCP78527 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKDCP78527 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PRKDCP78527 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PRKDCP78527 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKDCP78527 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PRKDCP78527 HLA-G-202ENST00000376815 851 ntBASIC14.15□□□□□ -0.14
PRKDCP78527 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PRKDCP78527 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PRKDCP78527 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.15□□□□□ -0.14
PRKDCP78527 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.15□□□□□ -0.14
PRKDCP78527 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.15□□□□□ -0.14
PRKDCP78527 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PRKDCP78527 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PRKDCP78527 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC14.14□□□□□ -0.15
PRKDCP78527 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.14□□□□□ -0.15
PRKDCP78527 AL121772.3-201ENST00000610840 674 ntBASIC14.14□□□□□ -0.15
PRKDCP78527 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
PRKDCP78527 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC14.14□□□□□ -0.15
PRKDCP78527 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC14.14□□□□□ -0.15
PRKDCP78527 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.14□□□□□ -0.15
PRKDCP78527 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.14□□□□□ -0.15
PRKDCP78527 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
PRKDCP78527 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC14.14□□□□□ -0.15
PRKDCP78527 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.14□□□□□ -0.15
PRKDCP78527 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.14□□□□□ -0.15
PRKDCP78527 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.14□□□□□ -0.15
PRKDCP78527 KRT8P41-201ENST00000533985 1514 ntBASIC14.14□□□□□ -0.15
PRKDCP78527 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.14□□□□□ -0.15
PRKDCP78527 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.14□□□□□ -0.15
PRKDCP78527 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.14□□□□□ -0.15
PRKDCP78527 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.14□□□□□ -0.15
PRKDCP78527 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
PRKDCP78527 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 KRT18P67-201ENST00000432816 1264 ntBASIC14.13□□□□□ -0.15
PRKDCP78527 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.13□□□□□ -0.15
PRKDCP78527 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.13□□□□□ -0.15
PRKDCP78527 KRT16P6-202ENST00000425692 1426 ntBASIC14.13□□□□□ -0.15
PRKDCP78527 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 AL031284.1-201ENST00000419297 478 ntBASIC14.13□□□□□ -0.15
PRKDCP78527 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.13□□□□□ -0.15
PRKDCP78527 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.13□□□□□ -0.15
PRKDCP78527 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.13□□□□□ -0.15
PRKDCP78527 RASA4DP-201ENST00000460726 1199 ntBASIC14.13□□□□□ -0.15
PRKDCP78527 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.13□□□□□ -0.15
PRKDCP78527 AC106730.1-201ENST00000566722 1090 ntBASIC14.13□□□□□ -0.15
PRKDCP78527 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 AC093525.10-201ENST00000625130 1569 ntBASIC14.13□□□□□ -0.15
PRKDCP78527 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 MIR662-201ENST00000384847 95 ntBASIC14.13□□□□□ -0.15
PRKDCP78527 DRAXINP1-201ENST00000437611 948 ntBASIC14.13□□□□□ -0.15
PRKDCP78527 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.13□□□□□ -0.15
PRKDCP78527 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PRKDCP78527 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC14.12□□□□□ -0.15
PRKDCP78527 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.12□□□□□ -0.15
PRKDCP78527 RPSAP43-201ENST00000402237 625 ntBASIC14.12□□□□□ -0.15
PRKDCP78527 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PRKDCP78527 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms